STRINGSTRING
Noca_1359 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1359" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1359Hypothetical protein (227 aa)    
Predicted Functional Partners:
Noca_1358
Hypothetical protein (105 aa)
              0.651
Noca_1910
Hypothetical protein (413 aa)
   
          0.621
Noca_3724
Putative phosphodiesterase (222 aa)
   
          0.574
Noca_4463
Major facilitator transporter (449 aa)
   
          0.560
Noca_4606
N-acetyltransferase GCN5 (308 aa)
   
          0.552
Noca_2694
Serine/threonine protein kinase (422 aa)
   
          0.548
Noca_2831
Hemerythrin HHE cation binding domain-containing protein (184 aa)
   
          0.520
Noca_3102
Hypothetical protein (294 aa)
   
          0.519
Noca_4672
Sigma-70 region 2 domain-containing protein (203 aa)
   
          0.500
Noca_2025
Hypothetical protein (240 aa)
   
          0.476
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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