STRINGSTRING
Noca_1363 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1363" - Cupin in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1363Cupin (118 aa)    
Predicted Functional Partners:
Noca_1362
Hypothetical protein (109 aa)
              0.822
Noca_1361
Hypothetical protein (85 aa)
              0.815
Noca_0963
Glyoxalase/bleomycin resistance protein/dioxygenase (128 aa)
   
          0.668
Noca_1546
TadE family protein (137 aa)
   
          0.553
Noca_1915
Hypothetical protein (116 aa)
   
          0.545
Noca_4595
Regulatory protein LuxR (336 aa)
   
          0.543
Noca_2839
Carboxymuconolactone decarboxylase (187 aa)
   
          0.507
Noca_1360
Hypothetical protein (446 aa)
              0.488
Noca_1364
Xaa-Pro aminopeptidase (480 aa)
              0.479
Noca_2122
Hypothetical protein (200 aa)
   
          0.474
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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