STRINGSTRING
Noca_1368 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1368" - Single-strand binding protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1368Single-strand binding protein (185 aa)    
Predicted Functional Partners:
Noca_0317
DNA polymerase III subunits gamma and tau (678 aa)
   
 
  0.911
Noca_3050
DNA polymerase III subunit alpha (1183 aa)
 
 
  0.880
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1145 aa)
   
 
  0.857
Noca_2250
DNA primase catalytic core (1976 aa)
   
 
  0.825
Noca_1580
DNA primase catalytic core (1797 aa)
   
 
  0.825
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (244 aa)
 
 
 
  0.825
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (78 aa)
   
   
  0.824
Noca_4663
Single-strand binding protein (188 aa)
   
   
0.820
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (96 aa)
   
   
  0.811
Noca_2262
Single-strand binding protein/primosomal replication protein n (129 aa)
         
    0.800
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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