STRINGSTRING
Noca_1404 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1404" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1404ABC transporter-like protein (266 aa)    
Predicted Functional Partners:
Noca_1403
ABC transporter (300 aa)
 
  0.994
Noca_1402
Putative glycosyltransferase (659 aa)
 
   
  0.935
Noca_1400
Glycosyl transferase family protein (306 aa)
 
   
  0.920
Noca_1399
Glycosyl transferase family protein (315 aa)
 
   
  0.913
Noca_1401
UDP-galactopyranose mutase (395 aa)
   
   
  0.780
Noca_2799
Group 1 glycosyl transferase (421 aa)
 
 
  0.665
Noca_2994
Glycosyl transferase family protein (256 aa)
 
     
  0.589
Noca_4217
Group 1 glycosyl transferase (418 aa)
   
 
  0.588
mshA
Group 1 glycosyl transferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway (458 aa)
   
 
  0.588
Noca_3718
Glycogen synthase (397 aa)
   
 
  0.588
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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