STRINGSTRING
Noca_1405 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1405" - N-acetylmuramoyl-L-alanine amidase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1405N-acetylmuramoyl-L-alanine amidase (959 aa)    
Predicted Functional Partners:
Noca_0320
Hypothetical protein (197 aa)
   
          0.596
Noca_1441
Hypothetical protein (172 aa)
   
          0.557
Noca_4682
Hypothetical protein (735 aa)
   
          0.530
Noca_1402
Putative glycosyltransferase (659 aa)
 
          0.526
Noca_4433
Hypothetical protein (278 aa)
   
          0.521
Noca_4019
Metallophosphoesterase (480 aa)
   
          0.506
Noca_1400
Glycosyl transferase family protein (306 aa)
 
          0.478
Noca_0474
Hypothetical protein (256 aa)
   
          0.476
Noca_1404
ABC transporter-like protein (266 aa)
              0.463
Noca_1403
ABC transporter (300 aa)
              0.463
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (14%) [HD]