STRINGSTRING
Noca_1410 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1410" - LPPG:FO 2-phospho-L-lactate transferase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1410LPPG-FO 2-phospho-L-lactate transferase (337 aa)    
Predicted Functional Partners:
Noca_1409
F420-dependent oxidoreductase (321 aa)
 
 
  0.998
Noca_0863
FO synthase (852 aa)
 
 
  0.996
Noca_0814
FO synthase (842 aa)
 
 
  0.996
Noca_3619
FO synthase (841 aa)
 
 
  0.996
Noca_3295
Hypothetical protein (211 aa)
 
   
  0.992
Noca_0815
Hypothetical protein (205 aa)
 
   
    0.980
Noca_0865
Hypothetical protein (210 aa)
 
   
    0.973
Noca_0816
Reduced coenzyme F420-NADP oxidoreductase (229 aa)
 
     
  0.859
Noca_0864
Reduced coenzyme F420-NADP oxidoreductase (222 aa)
 
     
  0.857
Noca_0243
Reduced coenzyme F420-NADP oxidoreductase (225 aa)
 
     
  0.852
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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