STRINGSTRING
Noca_1413 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1413" - Hypothetical protein in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1413Hypothetical protein (475 aa)    
Predicted Functional Partners:
Noca_1412
Glycosyl transferase family protein (951 aa)
 
          0.968
Noca_2458
Hypothetical protein (175 aa)
   
          0.771
Noca_0366
Type II secretion system protein (240 aa)
   
          0.702
Noca_0365
Type II secretion system protein (258 aa)
   
          0.700
Noca_2946
Hypothetical protein (198 aa)
   
          0.679
Noca_1508
UvrD/REP helicase (1060 aa)
   
          0.669
Noca_4674
Alanine racemase domain-containing protein (351 aa)
   
          0.659
Noca_4673
Methicillin resistance protein (383 aa)
   
          0.650
Noca_1787
Hypothetical protein (255 aa)
   
          0.646
Noca_1411
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (84 aa)
              0.627
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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