STRINGSTRING
Noca_1414 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1414" - Ornithine cyclodeaminase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1414Ornithine cyclodeaminase (317 aa)    
Predicted Functional Partners:
Noca_0072
Ornithine cyclodeaminase (306 aa)
   
   
    0.953
Noca_0691
Ornithine cyclodeaminase (339 aa)
   
   
    0.950
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (267 aa)
       
  0.913
Noca_4523
Aminotransferase (413 aa)
       
  0.913
Noca_0480
L-proline dehydrogenase (316 aa)
       
  0.905
Noca_0088
L-proline dehydrogenase (308 aa)
       
  0.905
Noca_1415
Alanine racemase domain-containing protein (386 aa)
              0.873
Noca_0923
Triple helix repeat-containing collagen (236 aa)
   
          0.654
Noca_1417
Dihydroorotase (558 aa)
              0.581
Noca_1419
Binding-protein-dependent transport system inner membrane protein (314 aa)
              0.581
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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