STRINGSTRING
Noca_1415 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1415" - Alanine racemase domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1415Alanine racemase domain-containing protein (386 aa)    
Predicted Functional Partners:
Noca_1414
Ornithine cyclodeaminase (317 aa)
              0.873
Noca_1417
Dihydroorotase (558 aa)
 
          0.843
Noca_1421
Aldehyde dehydrogenase (490 aa)
   
 
    0.651
Noca_1418
Binding-protein-dependent transport systems inner membrane component (276 aa)
              0.634
Noca_1416
Aldo/keto reductase (309 aa)
   
        0.629
Noca_1419
Binding-protein-dependent transport system inner membrane protein (314 aa)
              0.628
Noca_1845
Endoribonuclease L-PSP (115 aa)
 
        0.529
Noca_4278
Endoribonuclease L-PSP (165 aa)
 
        0.527
Noca_2335
Endoribonuclease L-PSP (127 aa)
 
        0.524
Noca_0336
Endoribonuclease L-PSP (154 aa)
 
        0.517
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (14%) [HD]