STRINGSTRING
Noca_1419 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1419" - Binding-protein-dependent transport system inner membrane protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1419Binding-protein-dependent transport system inner membrane protein (314 aa)    
Predicted Functional Partners:
Noca_1418
Binding-protein-dependent transport systems inner membrane component (276 aa)
          0.970
Noca_1420
Extracellular solute-binding protein (424 aa)
 
          0.915
Noca_1417
Dihydroorotase (558 aa)
              0.859
Noca_1416
Aldo/keto reductase (309 aa)
              0.859
Noca_3681
Binding-protein-dependent transport system inner membrane protein (305 aa)
          0.782
Noca_0871
Binding-protein-dependent transport systems inner membrane component (284 aa)
          0.782
Noca_0043
Binding-protein-dependent transport system inner membrane protein (290 aa)
          0.782
Noca_1063
ABC transporter-like protein (360 aa)
   
          0.772
Noca_3916
Binding-protein-dependent transport system inner membrane protein (309 aa)
          0.769
Noca_1305
Binding-protein-dependent transport system inner membrane protein (295 aa)
          0.763
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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