STRINGSTRING
Noca_1428 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1428" - Acyltransferase 3 in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1428Acyltransferase 3 (387 aa)    
Predicted Functional Partners:
Noca_1427
Hypothetical protein (342 aa)
              0.756
Noca_1425
Phosphomannomutase (469 aa)
              0.738
Noca_1426
Hypothetical protein (56 aa)
              0.730
Noca_1424
Hypothetical protein (119 aa)
 
          0.721
Noca_1429
Protoporphyrinogen oxidase (473 aa)
 
          0.684
Noca_3163
Branched-chain amino acid transport (100 aa)
   
          0.648
Noca_4448
Putative integral membrane protein (239 aa)
   
          0.628
Noca_1430
Radical SAM domain-containing protein (389 aa)
              0.609
Noca_1461
TrkA domain-containing protein (653 aa)
   
          0.543
Noca_1431
Hypothetical protein (314 aa)
              0.519
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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