STRINGSTRING
Noca_1429 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1429" - Protoporphyrinogen oxidase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1429Protoporphyrinogen oxidase (473 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (366 aa)
 
 
  0.995
Noca_2889
Protoporphyrin IX magnesium-chelatase (653 aa)
   
 
  0.992
Noca_0952
Putative magnesium chelatase subunit ChlI (462 aa)
   
 
  0.971
Noca_1898
Coproporphyrinogen III oxidase (426 aa)
   
 
  0.970
Noca_3247
Mg chelatase subunit ChlI (528 aa)
         
    0.960
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
 
   
  0.930
Noca_1430
Radical SAM domain-containing protein (389 aa)
              0.869
Noca_3672
Protoporphyrinogen oxidase (460 aa)
   
   
 
0.843
Noca_2314
Flavodoxin-like (170 aa)
         
  0.800
hemA1
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) (430 aa)
 
   
  0.799
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (16%) [HD]