STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1464KEGG: tfu:Tfu_0510 hypothetical protein. (215 aa)    
Predicted Functional Partners:
Noca_1465
PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pac:PPA1328 predicted metal-dependent phosphoesterase.
       0.773
Noca_3463
KEGG: sco:SCO2609 rod shape-determining protein.
  
     0.748
Noca_4290
PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
  
     0.727
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
  
     0.710
Noca_1794
Hypothetical protein; KEGG: tfu:Tfu_2396 putative cellulose-binding protein.
  
     0.709
Noca_1716
KEGG: fal:FRAAL5991 anti-sigma factor (partial match).
  
     0.694
Noca_2318
KEGG: sma:SAV2509 hypothetical protein.
  
     0.665
Noca_2368
PFAM: sporulation and cell division protein SsgA; KEGG: fra:Francci3_1359 sporulation and cell division protein SsgA.
  
     0.653
Noca_3586
Hypothetical protein; KEGG: sma:SAV3318 putative RNA polymerase ECF-subfamily sigma factor.
  
     0.653
Noca_0128
KEGG: nha:Nham_2367 hypothetical protein.
  
     0.647
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.