STRINGSTRING
Noca_1482 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1482" - Daunorubicin resistance ABC transporter ATPase subunit in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1482Daunorubicin resistance ABC transporter ATPase subunit (344 aa)    
Predicted Functional Partners:
Noca_1483
ABC transporter (269 aa)
  0.993
Noca_0121
ABC transporter (252 aa)
 
  0.920
Noca_2544
ABC transporter (265 aa)
   
  0.786
Noca_0479
ABC transporter (245 aa)
 
  0.786
Noca_2212
Putative ABC antibiotics transporter (528 aa)
 
    0.712
Noca_2560
Putative ABC transporter (523 aa)
 
 
    0.668
Noca_1666
Putative ABC antibiotics transporter (548 aa)
 
 
    0.668
Noca_1955
Cytochrome c assembly protein (254 aa)
       
  0.662
Noca_1478
ATPase (340 aa)
         
  0.643
Noca_1479
Hypothetical protein (440 aa)
              0.642
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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