STRINGSTRING
Noca_1488 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1488" - Xanthine/uracil/vitamin C permease in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1488Xanthine/uracil/vitamin C permease (487 aa)    
Predicted Functional Partners:
Noca_1491
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (803 aa)
 
     
  0.912
Noca_1492
Carbon monoxide dehydrogenase subunit G (216 aa)
 
          0.891
Noca_1490
2Fe-2S iron-sulfur cluster binding domain-containing protein (173 aa)
         
  0.879
Noca_1489
Carbon monoxide dehydrogenase (280 aa)
         
  0.873
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (213 aa)
 
   
  0.824
Noca_1142
Urate oxidase; Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin (289 aa)
   
   
  0.809
pyrB
Aspartate carbamoyltransferase catalytic subunit (324 aa)
   
   
  0.786
Noca_1631
Aspartate carbamoyltransferase (317 aa)
   
   
  0.786
Noca_3928
Xanthine/uracil/vitamin C permease (491 aa)
 
   
  0.763
Noca_2608
Inosine 5-monophosphate dehydrogenase (478 aa)
 
   
  0.718
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (5%) [HD]