STRINGSTRING
Noca_1505 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1505" - Barbiturase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1505Barbiturase (371 aa)    
Predicted Functional Partners:
Noca_1504
Carbamate kinase (323 aa)
              0.845
Noca_4270
Barbiturase (371 aa)
   
   
 
0.804
Noca_1497
Hydantoinase B/oxoprolinase (659 aa)
 
          0.782
Noca_1487
Hypothetical protein (438 aa)
 
          0.767
Noca_1491
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (803 aa)
 
          0.760
Noca_1492
Carbon monoxide dehydrogenase subunit G (216 aa)
 
          0.756
Noca_0676
Hypothetical protein (170 aa)
   
          0.756
Noca_1556
Hypothetical protein (326 aa)
   
          0.607
Noca_1836
CdaR family transcriptional regulator (384 aa)
   
          0.593
Noca_3309
Peroxiredoxins-like protein (192 aa)
   
          0.562
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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