STRINGSTRING
Noca_1520 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1520" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1520Hypothetical protein (52 aa)    
Predicted Functional Partners:
Noca_1511
Hypothetical protein (264 aa)
   
          0.676
Noca_1214
Putative signal peptide (224 aa)
   
          0.656
Noca_0893
Hypothetical protein (266 aa)
   
          0.619
Noca_4053
Hypothetical protein (266 aa)
   
          0.573
Noca_1215
Hypothetical protein (437 aa)
   
          0.566
Noca_1521
Short chain enoyl-CoA hydratase / enoyl-CoA hydratase (279 aa)
              0.565
Noca_1519
Hypothetical protein (249 aa)
              0.537
mshB
LmbE family protein; Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway (302 aa)
   
          0.525
Noca_1254
Type II secretion system protein (312 aa)
   
          0.516
Noca_1213
DNA binding domain-containing protein (81 aa)
   
          0.473
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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