STRINGSTRING
Noca_1534 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1534" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1534Hypothetical protein (181 aa)    
Predicted Functional Partners:
Noca_1533
Putative chromate resistance protein (141 aa)
 
          0.971
Noca_1532
Chromate transporter (452 aa)
 
          0.911
Noca_1531
Major facilitator transporter (405 aa)
 
          0.803
Noca_1535
Putative surface antigen protein (347 aa)
 
          0.714
Noca_1656
Aminotransferase (753 aa)
   
          0.649
Noca_1657
Hypothetical protein (419 aa)
   
          0.555
Noca_0589
Hypothetical protein (408 aa)
   
          0.494
Noca_1536
DNA binding domain-containing protein (76 aa)
              0.476
Noca_2059
Undecaprenyl-diphosphatase (204 aa)
   
          0.474
Noca_1588
Type III restriction enzyme, res subunit (1094 aa)
   
          0.461
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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