STRINGSTRING
Noca_1554 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1554" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1554Hypothetical protein (246 aa)    
Predicted Functional Partners:
Noca_1553
Undecaprenyl-diphosphatase (207 aa)
         
  0.873
Noca_1552
DedA family membrane protein (216 aa)
 
       
0.538
Noca_2044
NAD synthetase (681 aa)
   
      0.509
nadK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP (319 aa)
       
    0.502
Noca_1555
Hypothetical protein (509 aa)
              0.486
Noca_3006
DNA polymerase I (889 aa)
   
 
  0.481
Noca_2410
Shikimate dehydrogenase (270 aa)
         
  0.400
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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