STRINGSTRING
Noca_1556 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1556" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1556Hypothetical protein (326 aa)    
Predicted Functional Partners:
Noca_1557
Hypothetical protein (324 aa)
              0.659
Noca_1505
Barbiturase (371 aa)
   
          0.607
Noca_4270
Barbiturase (371 aa)
   
          0.599
Noca_4041
Hypothetical protein (290 aa)
   
          0.567
Noca_1555
Hypothetical protein (509 aa)
              0.558
Noca_4490
GDSL family lipase (299 aa)
   
          0.552
Noca_1560
ATPase domain-containing protein (486 aa)
              0.477
Noca_1559
Response regulator receiver (228 aa)
              0.477
Noca_1558
Hypothetical protein (564 aa)
              0.477
Noca_3709
Peptidase S15 (519 aa)
   
          0.442
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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