STRINGSTRING
Noca_1560 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1560" - ATPase domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1560ATPase domain-containing protein (486 aa)    
Predicted Functional Partners:
Noca_1559
Response regulator receiver (228 aa)
 
  0.988
Noca_1613
Response regulator receiver (225 aa)
 
  0.945
Noca_1598
Response regulator receiver (226 aa)
 
  0.945
Noca_1610
Two component transcriptional regulator (232 aa)
 
  0.944
Noca_3695
Response regulator receiver (236 aa)
 
  0.942
Noca_2939
Response regulator receiver (232 aa)
 
  0.937
Noca_4046
Response regulator receiver (225 aa)
 
  0.930
Noca_2062
Two component transcriptional regulator (228 aa)
 
  0.923
Noca_4454
Dehydrogenase, E1 component (726 aa)
   
  0.920
Noca_4519
Response regulator receiver (234 aa)
 
  0.915
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]