STRINGSTRING
Noca_1561 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1561" - PA-phosphatase-like phosphoesterase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1561PA-phosphatase-like phosphoesterase (349 aa)    
Predicted Functional Partners:
Noca_1563
Group 1 glycosyl transferase (743 aa)
              0.674
Noca_1562
Dolichyl-phosphate beta-D-mannosyltransferase (258 aa)
              0.674
Noca_1564
LmbE family protein (249 aa)
              0.672
Noca_1560
ATPase domain-containing protein (486 aa)
              0.627
Noca_1559
Response regulator receiver (228 aa)
              0.627
Noca_1558
Hypothetical protein (564 aa)
              0.627
Noca_1557
Hypothetical protein (324 aa)
              0.456
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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