STRINGSTRING
Noca_1668 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1668" - Putative dehydrogenase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1668Putative dehydrogenase (689 aa)    
Predicted Functional Partners:
Noca_1667
Hypothetical protein (358 aa)
              0.834
Noca_1669
Diacylglycerol O-acyltransferase (490 aa)
 
          0.741
Noca_1666
Putative ABC antibiotics transporter (548 aa)
              0.585
Noca_1665
ABC transporter-like protein (316 aa)
              0.585
Noca_0487
Phospholipid/glycerol acyltransferase (375 aa)
   
          0.577
Noca_2917
Short chain dehydrogenase (665 aa)
 
          0.538
Noca_1664
TetR family transcriptional regulator (189 aa)
              0.450
Noca_4502
Carboxyl transferase (497 aa)
              0.408
lysS
lysyl-tRNA synthetase (516 aa)
              0.408
Noca_1621
Hypothetical protein (228 aa)
   
          0.409
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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