STRINGSTRING
Noca_1693 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1693" - RNA-binding S4 domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1693RNA-binding S4 domain-containing protein (84 aa)    
Predicted Functional Partners:
Noca_1692
Hypothetical protein (420 aa)
              0.859
Noca_1691
Glycerol-3-phosphate cytidylyltransferase (132 aa)
              0.655
Noca_1233
Glyoxalase/bleomycin resistance protein/dioxygenase (253 aa)
 
          0.469
Noca_1690
Hypothetical protein (533 aa)
              0.452
Noca_4450
Sigma-70 region 4 domain-containing protein (300 aa)
              0.408
Noca_3813
Sigma-70 region 2 domain-containing protein (257 aa)
              0.408
Noca_2958
DNA topoisomerase IV subunit B (710 aa)
              0.408
Noca_2949
DNA topoisomerase IV subunit A (826 aa)
              0.408
Noca_2833
Anti-anti-sigma factor (111 aa)
              0.408
Noca_1925
Sigma-70 region 4 domain-containing protein (282 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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