STRINGSTRING
Noca_1711 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1711" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1711Hypothetical protein (283 aa)    
Predicted Functional Partners:
Noca_1710
Hypothetical protein (551 aa)
              0.840
Noca_1709
N-acetyltransferase GCN5 (165 aa)
              0.840
Noca_1708
Thioesterase superfamily protein (127 aa)
              0.840
Noca_3472
N-acetyltransferase GCN5 (301 aa)
   
          0.656
Noca_1712
Histidine kinase, dimerisation/phosphoacceptor (491 aa)
              0.654
Noca_4019
Metallophosphoesterase (480 aa)
   
          0.652
Noca_4330
Peptidoglycan binding domain-containing protein (485 aa)
   
          0.651
Noca_4501
NAD-dependent epimerase/dehydratase (330 aa)
   
          0.619
Noca_4682
Hypothetical protein (735 aa)
   
          0.604
Noca_2344
N-acetyltransferase GCN5 (234 aa)
   
          0.592
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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