STRINGSTRING
Noca_1727 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1727" - Malate dehydrogenase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1727Malate dehydrogenase (396 aa)    
Predicted Functional Partners:
Noca_1061
Fumarase (571 aa)
 
 
  0.992
Noca_2954
Phosphate acetyltransferase; Involved in acetate metabolism (696 aa)
   
 
  0.986
fumC
Fumarate hydratase (465 aa)
   
  0.981
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (328 aa)
   
  0.979
Noca_3020
Pyruvate kinase (487 aa)
   
  0.972
Noca_1185
Pyruvate, water dikinase (275 aa)
   
 
  0.966
Noca_4175
Thiamine pyrophosphate protein (593 aa)
   
 
  0.959
Noca_0888
Citrate synthase (447 aa)
   
 
  0.956
Noca_0733
Citrate synthase 2 (368 aa)
   
 
  0.956
Noca_0987
Pyruvate phosphate dikinase (897 aa)
   
 
  0.953
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]