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Noca_1730 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1730" - Regulatory protein TetR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1730Regulatory protein TetR (201 aa)    
Predicted Functional Partners:
Noca_2848
3-ketoacyl-ACP reductase (444 aa)
 
   
  0.707
Noca_2847
acetyl-CoA acetyltransferase (426 aa)
 
     
  0.699
Noca_2849
Dehydratase (288 aa)
 
          0.671
Noca_3667
Fatty acid desaturase (400 aa)
 
   
  0.631
Noca_1731
Hypothetical protein (78 aa)
              0.622
Noca_2917
Short chain dehydrogenase (665 aa)
   
        0.602
Noca_1232
Short-chain dehydrogenase/reductase SDR (305 aa)
 
     
  0.601
Noca_3767
Fatty acid desaturase (384 aa)
 
   
  0.583
Noca_4480
Fatty acid desaturase (409 aa)
 
   
  0.574
Noca_2519
Hypothetical protein (100 aa)
   
          0.552
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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