STRINGSTRING
Noca_1736 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1736" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1736Hypothetical protein (58 aa)    
Predicted Functional Partners:
Noca_1737
Alpha-ketoglutarate decarboxylase (1263 aa)
              0.918
Noca_3453
Hypothetical protein (236 aa)
   
          0.772
Noca_3459
Radical SAM domain-containing protein (663 aa)
   
          0.750
Noca_2308
Hypothetical protein (86 aa)
   
          0.724
Noca_1939
Hypothetical protein (106 aa)
   
          0.718
Noca_3444
Methionine synthase, vitamin-B12 independent (338 aa)
   
          0.651
Noca_1202
Hypothetical protein (100 aa)
   
          0.581
Noca_0243
Reduced coenzyme F420-NADP oxidoreductase (225 aa)
   
          0.580
Noca_3077
Type 11 methyltransferase (252 aa)
   
          0.569
Noca_3811
Vitamin B12-dependent ribonucleotide reductase (956 aa)
   
          0.568
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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