STRINGSTRING
Noca_1739 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1739" - Cell envelope-related transcriptional attenuator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1739Cell envelope-related transcriptional attenuator (302 aa)    
Predicted Functional Partners:
Noca_3302
Cell envelope-related transcriptional attenuator (406 aa)
 
          0.863
Noca_1738
Hypothetical protein (196 aa)
              0.859
Noca_4185
Lipopolysaccharide biosynthesis protein (473 aa)
 
     
  0.735
Noca_1398
Cell envelope-related transcriptional attenuator (481 aa)
   
          0.713
Noca_0784
Cell envelope-related transcriptional attenuator (400 aa)
 
       
0.584
Noca_1737
Alpha-ketoglutarate decarboxylase (1263 aa)
              0.533
Noca_1736
Hypothetical protein (58 aa)
              0.533
Noca_2614
Cell envelope-related transcriptional attenuator (508 aa)
   
          0.530
recF
Recombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (420 aa)
   
          0.479
Noca_4219
Sugar transferase (195 aa)
         
  0.478
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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