STRINGSTRING
Noca_1741 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1741" - HNH nuclease in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1741HNH nuclease (414 aa)    
Predicted Functional Partners:
Noca_4183
HNH endonuclease (434 aa)
   
          0.758
Noca_3219
HNH endonuclease (427 aa)
   
          0.756
Noca_2758
Hypothetical protein (441 aa)
   
          0.704
Noca_1406
Hypothetical protein (246 aa)
   
          0.703
Noca_3520
Hypothetical protein (314 aa)
   
          0.696
Noca_4266
Hypothetical protein (350 aa)
   
          0.668
Noca_1721
Exonuclease V subunit alpha (866 aa)
   
          0.643
Noca_0927
Hypothetical protein (341 aa)
   
          0.643
Noca_1102
Exonuclease V subunit alpha (872 aa)
   
          0.639
Noca_3125
Hypothetical protein (77 aa)
   
          0.608
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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