STRINGSTRING
rho protein (Nocardioides sp. JS614) - STRING interaction network
"rho" - Transcription termination factor Rho in Nocardioides sp. JS614
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (578 aa)    
Predicted Functional Partners:
nusG
Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination (317 aa)
   
 
  0.955
Noca_3006
DNA polymerase I (889 aa)
   
   
  0.835
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (437 aa)
 
   
  0.719
ctc
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (223 aa)
 
   
  0.668
Noca_2989
30S ribosomal protein S1 (490 aa)
 
   
  0.667
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (357 aa)
   
   
  0.659
nusA
Transcription elongation factor NusA; Participates in both transcription termination and antitermination (327 aa)
 
   
  0.648
atpB
ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (276 aa)
 
   
  0.642
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (75 aa)
   
   
  0.639
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
   
   
  0.629
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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