STRINGSTRING
Noca_1792 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1792" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1792Hypothetical protein (314 aa)    
Predicted Functional Partners:
Noca_1791
Hypothetical protein (180 aa)
 
          0.945
Noca_3946
Hypothetical protein (175 aa)
   
          0.766
Noca_0914
Hypothetical protein (150 aa)
   
          0.618
Noca_2337
Type 12 methyltransferase (440 aa)
   
          0.599
Noca_4667
Hypothetical protein (137 aa)
   
          0.584
Noca_0882
ABC transporter-like protein (574 aa)
   
          0.565
Noca_3787
Heavy metal transport/detoxification protein (72 aa)
   
          0.499
Noca_1196
Hypothetical protein (174 aa)
   
          0.496
Noca_2208
Putative transcriptional regulator (104 aa)
   
          0.458
Noca_2758
Hypothetical protein (441 aa)
   
          0.454
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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