STRINGSTRING
Noca_1793 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1793" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1793Hypothetical protein (387 aa)    
Predicted Functional Partners:
Noca_1794
Hypothetical protein (446 aa)
              0.859
Noca_4529
Anthranilate synthase component I/chorismate-binding protein (666 aa)
   
      0.614
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (341 aa)
       
      0.610
Noca_4528
Anthranilate synthase, component II (187 aa)
   
      0.591
Noca_1795
crotonyl-CoA reductase (450 aa)
   
   
  0.561
Noca_1336
Putative ribonuclease BN (377 aa)
 
        0.528
Noca_3184
PTS system fructose subfamily transporter subunit IIC (682 aa)
     
      0.526
Noca_3203
Peptidase M50 (453 aa)
 
        0.462
Noca_2905
Hypothetical protein (238 aa)
   
          0.447
Noca_3960
Hypothetical protein (845 aa)
 
 
      0.429
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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