STRINGSTRING
Noca_1804 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1804" - Thioredoxin domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1804Thioredoxin domain-containing protein (314 aa)    
Predicted Functional Partners:
Noca_3321
DeoR family transcriptional regulator (245 aa)
       
      0.793
Noca_3182
DeoR family transcriptional regulator (255 aa)
       
      0.793
Noca_1803
acetyl-CoA hydrolase/transferase (402 aa)
              0.646
Noca_1713
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (83 aa)
   
          0.637
Noca_2911
Hypothetical protein (96 aa)
   
          0.565
Noca_2669
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (128 aa)
   
          0.532
Noca_2710
Regulatory protein MerR (198 aa)
   
        0.526
Noca_2573
Phosphoglycerate mutase (194 aa)
   
          0.515
Noca_0500
Phosphoglycerate mutase (226 aa)
 
          0.514
Noca_1802
methylmalonyl-CoA mutase (562 aa)
              0.500
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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