STRINGSTRING
Noca_1854 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1854" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1854Hypothetical protein (295 aa)    
Predicted Functional Partners:
Noca_1791
Hypothetical protein (180 aa)
   
          0.778
Noca_3946
Hypothetical protein (175 aa)
   
          0.766
Noca_1853
acyl-CoA dehydrogenase domain-containing protein (608 aa)
              0.745
Noca_1852
NmrA family protein (278 aa)
              0.745
Noca_1851
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein (532 aa)
              0.745
Noca_1850
Hypothetical protein (117 aa)
              0.745
Noca_1849
Short-chain dehydrogenase/reductase SDR (233 aa)
              0.661
Noca_1848
FAD dependent oxidoreductase (378 aa)
              0.661
Noca_2337
Type 12 methyltransferase (440 aa)
   
          0.637
Noca_4667
Hypothetical protein (137 aa)
   
          0.605
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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