STRINGSTRING
Noca_1868 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1868" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1868Hypothetical protein (112 aa)    
Predicted Functional Partners:
nhaA2
Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons (616 aa)
              0.829
Noca_1866
Hypothetical protein (305 aa)
 
          0.772
Noca_0824
Hypothetical protein (77 aa)
 
        0.743
Noca_1869
Hypothetical protein (189 aa)
   
        0.615
Noca_1870
Regulatory protein MarR (158 aa)
              0.470
Noca_1341
Pirin domain-containing protein (315 aa)
              0.408
Noca_0663
Pirin domain-containing protein (351 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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