STRINGSTRING
Noca_1870 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1870" - Regulatory protein MarR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1870Regulatory protein MarR (158 aa)    
Predicted Functional Partners:
Noca_1869
Hypothetical protein (189 aa)
         
  0.813
Noca_1871
Cytochrome P450 (379 aa)
              0.684
Noca_2143
Regulatory protein MarR (214 aa)
   
          0.541
Noca_4605
Hypothetical protein (196 aa)
         
  0.510
Noca_1868
Hypothetical protein (112 aa)
              0.470
Noca_3664
Regulatory protein LuxR (215 aa)
     
 
  0.466
Noca_3643
Two component LuxR family transcriptional regulator (215 aa)
     
 
  0.466
Noca_3606
Regulatory protein LuxR (229 aa)
     
 
  0.466
Noca_3488
Response regulator receiver (229 aa)
     
 
  0.466
Noca_3120
Response regulator receiver (212 aa)
     
 
  0.466
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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