STRINGSTRING
Noca_1876 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1876" - Natural resistance-associated macrophage protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1876Natural resistance-associated macrophage protein (409 aa)    
Predicted Functional Partners:
Noca_1877
Hypothetical protein (150 aa)
              0.859
Noca_1875
Hypothetical protein (230 aa)
              0.859
Noca_1878
Alpha/beta hydrolase domain-containing protein (308 aa)
              0.762
Noca_4551
Carbamoyl-phosphate synthase subunit L (633 aa)
   
        0.616
Noca_2976
Urea amidolyase-like protein (298 aa)
   
   
  0.602
Noca_0092
Urea amidolyase-like protein (282 aa)
   
   
  0.602
Noca_0199
Hydantoin racemase-like protein (264 aa)
   
          0.601
Noca_0998
P-type HAD superfamily ATPase (844 aa)
   
 
  0.599
Noca_1960
Cytochrome C biogenesis protein (175 aa)
       
      0.592
Noca_2978
LamB/YcsF family protein (231 aa)
   
   
  0.591
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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