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Noca_1899 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1899" - TM2 domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1899TM2 domain-containing protein (155 aa)    
Predicted Functional Partners:
Noca_1898
Coproporphyrinogen III oxidase (426 aa)
              0.763
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1145 aa)
              0.742
Noca_1896
Putative DNA-directed DNA polymerase (520 aa)
              0.705
Noca_1895
Hypothetical protein (228 aa)
              0.705
Noca_1894
AMP-dependent synthetase and ligase (613 aa)
              0.511
Noca_3806
ERCC4 domain-containing protein (330 aa)
   
          0.447
Noca_3029
Hypothetical protein (127 aa)
 
          0.444
Noca_0242
Regulatory protein TetR (188 aa)
   
          0.440
Noca_1983
Alpha/beta hydrolase fold protein (310 aa)
   
          0.430
Noca_0163
Hypothetical protein (284 aa)
   
          0.414
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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