STRINGSTRING
Noca_1910 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1910" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1910Hypothetical protein (413 aa)    
Predicted Functional Partners:
Noca_1909
Histidine triad (HIT) protein (112 aa)
              0.859
Noca_4638
N-acetyltransferase GCN5 (222 aa)
   
          0.688
Noca_1908
Sigma-70 factor (166 aa)
              0.648
Noca_1907
Hypothetical protein (313 aa)
              0.648
Noca_1271
Peptidase S1 and S6, chymotrypsin/Hap (280 aa)
   
          0.631
Noca_1359
Hypothetical protein (227 aa)
   
          0.621
Noca_2229
Peptidoglycan-binding LysM (1086 aa)
   
          0.607
Noca_1906
Hypothetical protein (294 aa)
              0.581
Noca_4463
Major facilitator transporter (449 aa)
   
          0.574
Noca_1479
Hypothetical protein (440 aa)
   
          0.557
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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