STRINGSTRING
Noca_1911 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1911" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1911Hypothetical protein (101 aa)    
Predicted Functional Partners:
Noca_1912
PhoH family protein (345 aa)
              0.636
ybeY
Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (149 aa)
              0.602
Noca_1915
Hypothetical protein (116 aa)
              0.531
Noca_1914
CBS domain-containing protein (430 aa)
              0.531
Noca_1917
Cyclopropane-fatty-acyl-phospholipid synthase (424 aa)
              0.428
Noca_1916
FAD linked oxidase domain-containing protein (459 aa)
              0.428
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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