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Noca_1923 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1923" - Stage II sporulation E family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1923Stage II sporulation E family protein (511 aa)    
Predicted Functional Partners:
Noca_2833
Anti-anti-sigma factor (111 aa)
   
 
  0.743
Noca_0371
Anti-anti-sigma factor (112 aa)
   
 
  0.743
Noca_3184
PTS system fructose subfamily transporter subunit IIC (682 aa)
     
      0.615
Noca_1922
Hypothetical protein (266 aa)
              0.588
Noca_1921
Hypothetical protein (289 aa)
              0.588
Noca_1695
Stage II sporulation E family protein (346 aa)
   
          0.579
Noca_4467
Putative hydrogenase HycP (220 aa)
   
          0.555
Noca_1768
Putative transcriptional regulator (203 aa)
   
          0.538
Noca_2855
PAS/PAC sensor signal transduction histidine kinase (712 aa)
   
 
  0.513
Noca_3713
NAD-dependent epimerase/dehydratase (306 aa)
   
          0.456
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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