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Noca_1924 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1924" - ANTAR domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1924ANTAR domain-containing protein (248 aa)    
Predicted Functional Partners:
Noca_1925
Sigma-70 region 4 domain-containing protein (282 aa)
              0.860
Noca_4152
Hypothetical protein (201 aa)
   
          0.613
Noca_4334
Hypothetical protein (167 aa)
   
          0.597
Noca_1678
CDP-alcohol phosphatidyltransferase (660 aa)
   
          0.591
Noca_2672
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (508 aa)
   
          0.583
Noca_3497
Glycosyl transferase family protein (496 aa)
   
          0.562
Noca_4380
Sucraseferredoxin family protein (284 aa)
   
          0.520
Noca_0119
Hypothetical protein (246 aa)
   
          0.512
Noca_3832
Hypothetical protein (64 aa)
   
          0.495
Noca_1926
Alcohol dehydrogenase (393 aa)
 
          0.486
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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