STRINGSTRING
Noca_1939 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1939" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1939Hypothetical protein (106 aa)    
Predicted Functional Partners:
Noca_1800
Hypothetical protein (170 aa)
   
          0.730
Noca_1736
Hypothetical protein (58 aa)
   
          0.718
Noca_1938
Periplasmic component of the Tol biopolymer transport system-like (593 aa)
              0.715
Noca_3034
ABC transporter-like protein (597 aa)
   
          0.698
Noca_1943
Hypothetical protein (289 aa)
 
          0.695
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly) (471 aa)
              0.695
Noca_1941
Hypothetical protein (256 aa)
              0.654
Noca_2179
N-acetyltransferase GCN5 (246 aa)
   
          0.641
Noca_3128
Hypothetical protein (601 aa)
   
          0.639
Noca_4229
Hypothetical protein (98 aa)
   
          0.621
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]