STRINGSTRING
Noca_1949 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1949" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1949Hypothetical protein (294 aa)    
Predicted Functional Partners:
Noca_4647
NC domain-containing protein (149 aa)
   
          0.515
Noca_1948
Hypothetical protein (173 aa)
              0.477
Noca_1947
DNA primase (932 aa)
              0.477
Noca_2747
Hypothetical protein (220 aa)
   
          0.472
Noca_1640
Hypothetical protein (433 aa)
   
          0.467
Noca_1946
D-isomer specific 2-hydroxyacid dehydrogenase (304 aa)
              0.443
Noca_2947
Hypothetical protein (208 aa)
   
          0.441
Noca_2271
ATP dependent DNA ligase (318 aa)
   
          0.419
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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