STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2029Hypothetical protein; KEGG: cef:CE2619 putative transposase. (112 aa)    
Predicted Functional Partners:
Noca_0063
PFAM: transposase IS3/IS911 family protein; KEGG: mbo:Mb2839c probable transposase.
 
  
 0.804
Noca_0571
PFAM: transposase IS3/IS911 family protein; KEGG: cef:CE2618 putative transposase.
 
  
 0.804
Noca_1092
PFAM: transposase IS3/IS911 family protein; KEGG: cef:CE2618 putative transposase.
 
  
 0.804
Noca_1591
PFAM: transposase IS3/IS911 family protein; KEGG: cef:CE2618 putative transposase.
 
  
 0.804
Noca_2032
PFAM: transposase IS3/IS911 family protein; KEGG: cef:CE2618 putative transposase.
 
  
 0.804
Noca_3564
PFAM: transposase IS3/IS911 family protein; KEGG: cef:CE2618 putative transposase.
 
  
 0.804
Noca_2030
PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_5505 integrase, catalytic region.
     
 0.794
Noca_2154
PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_3191 integrase, catalytic region.
 
  
 0.746
Noca_0603
KEGG: mmc:Mmcs_3178 integrase, catalytic region.
  
     0.640
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.