STRINGSTRING
Noca_2043 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2043" - Type 11 methyltransferase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2043Type 11 methyltransferase (249 aa)    
Predicted Functional Partners:
Noca_2044
NAD synthetase (681 aa)
              0.721
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (295 aa)
              0.602
Noca_2047
Glutamine amidotransferase (240 aa)
 
          0.494
Noca_2041
Glucose sorbosone dehydrogenase (387 aa)
              0.480
Noca_3751
Hypothetical protein (115 aa)
   
          0.457
Noca_2040
Hypothetical protein (418 aa)
              0.446
Noca_3790
Type 11 methyltransferase (196 aa)
   
          0.438
Noca_1954
Putative lipoprotein (465 aa)
   
          0.425
Noca_2210
Type 11 methyltransferase (203 aa)
   
          0.419
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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