STRINGSTRING
Noca_2106 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2106" - Transcriptional regulator in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2106Transcriptional regulator (225 aa)    
Predicted Functional Partners:
Noca_2101
Multicopper oxidase, type 3 (911 aa)
 
          0.867
Noca_2102
Hypothetical protein (378 aa)
 
          0.864
Noca_2105
Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (892 aa)
              0.697
Noca_2107
Hypothetical protein (204 aa)
              0.674
Noca_2108
Peptidase S15 (782 aa)
              0.589
Noca_2100
Hypothetical protein (78 aa)
 
          0.564
Noca_2104
OsmC family protein (146 aa)
              0.556
Noca_2103
Hypothetical protein (159 aa)
              0.556
Noca_2109
Hypothetical protein (176 aa)
              0.555
Noca_2115
Hypothetical protein (361 aa)
              0.550
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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