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Noca_2132 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2132" - GntR family transcriptional regulator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2132GntR family transcriptional regulator (246 aa)    
Predicted Functional Partners:
Noca_0035
GntR family transcriptional regulator (230 aa)
   
   
  0.781
Noca_1422
GntR family transcriptional regulator (221 aa)
   
          0.761
Noca_1174
GntR family transcriptional regulator (241 aa)
   
   
  0.754
Noca_4456
GntR family transcriptional regulator (213 aa)
   
   
  0.748
Noca_0402
GntR family transcriptional regulator (239 aa)
   
 
  0.722
Noca_1173
GntR family transcriptional regulator (234 aa)
   
          0.711
Noca_2131
methylmalonyl-CoA mutase (569 aa)
              0.655
Noca_2129
phenylacetate--CoA ligase (472 aa)
              0.640
Noca_2130
LAO/AO transport system ATPase (327 aa)
              0.634
Noca_2128
Cobalamin B12-binding domain-containing protein (172 aa)
              0.634
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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