STRINGSTRING
Noca_2210 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2210" - Type 11 methyltransferase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2210Type 11 methyltransferase (203 aa)    
Predicted Functional Partners:
Noca_2208
Putative transcriptional regulator (104 aa)
 
          0.727
Noca_2207
Heavy metal translocating P-type ATPase (656 aa)
 
          0.727
Noca_2212
Putative ABC antibiotics transporter (528 aa)
              0.653
Noca_2211
ABC transporter-like protein (312 aa)
              0.653
Noca_2209
ArsR family transcriptional regulator (130 aa)
              0.648
Noca_2206
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (173 aa)
              0.537
Noca_2205
Cadmium resistance transporter (198 aa)
 
          0.453
Noca_2213
Hypothetical protein (241 aa)
              0.440
Noca_2043
Type 11 methyltransferase (249 aa)
   
          0.419
Noca_4452
Type 11 methyltransferase (277 aa)
   
          0.407
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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